Produce MCMC autocorrelation plot

Source: R/plot.R

Produce MCMC autocorrelation plot of alpha or log-likelihood

plot_acf(proj, K = NULL, rung = NULL, param = "alpha", col = "black")

Arguments

proj

an rmaverick project, as produced by the function mavproject()
K

which value of K to produce the plot for
rung

which value of K to produce the plot for. Defaults to the cold rung
param

whether to produce trace plot of admixture parameter ("alpha") or the log-likelihood ("loglike")
col

colour of the trace